PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.09G140100.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 240aa    MW: 27444.6 Da    PI: 7.4999
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.09G140100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.73.9e-101574555
                  AP2  5 GVrwdkkrgrWvAeIrdpseng..........krkrfslgkfgtaeeAakaaiaarkkleg 55
                         GV+ +k   ++  + rd ++n+          ++ r +lg+f taeeAa+a+++a+  l+g
  Manes.09G140100.1.p 15 GVSMNK-PSKFKGRNRDNNKNNkfvgvrqrppQKIRMWLGTFETAEEAARAYDEAACLLHG 74
                         666665.5666666666333333666553444459*********************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008476.1E-51674IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-132282IPR016177DNA-binding domain
PROSITE profilePS5103214.2362382IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-163482IPR001471AP2/ERF domain
SMARTSM003809.6E-193688IPR001471AP2/ERF domain
CDDcd000182.20E-203781No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MDIQFQQQKR HKNLGVSMNK PSKFKGRNRD NNKNNKFVGV RQRPPQKIRM WLGTFETAEE  60
AARAYDEAAC LLHGSNTRTN FITQVSLDSP FASRRMQGKN NKLKKNVLNT RTSISSSSSR  120
SDTSNPSSEI INDTQYFYDV YKPDTSNCRE VELGSSPSDL SWSFGAGFDL FPFSQEVLDF  180
PRQILLPETT SDLEYFTEFD RMNVERKTSA SLYAMNGVQE YMETVHDPIE ALWDLPSIY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012070434.11e-109PREDICTED: ethylene-responsive transcription factor RAP2-11-like
TrEMBLA0A067L5C61e-109A0A067L5C6_JATCU; Uncharacterized protein
STRINGPOPTR_0013s05330.12e-88(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33413069
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-09related to AP2 11